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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|219689107, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLPDGSDHG TQQTQALLSA TQEMELERRD YHVERPLLNQ EQLEDLGHWG PVSKTHPWRT  60
   61 WFRCSRARAK SLLIQHVPVL GWLPRYPVRE WLLGDLLSGL SVAIMQLPQG LAYALLAGLP 120
  121 PMFGLYSSFY PVFVYFLFGT SRHISVGTFA VMSVMVGGVT ESLTADEAFV QSLNTTVDGA 180
  181 RVQVAYTLSF LVGLFQVGLG LVHFGFVVTY LSEPLVRSYT TAASVQVLVS QLKYVFGIKL 240
  241 NSHSGPLSVI YTVLEVCAQL PKTVPGTVVT AIVAGVVLVL VKLLNEKLRR RLPLPIPGEL 300
  301 LTLIGATAIS YGVKLNDRFK VDVVGNITTG LIPPVAPKTE LFATLVGNAF AIAVVGFAIA 360
  361 ISLGKIFALR HGYRVDSNQE LVALGLSNLI GGFFQCFPVS CSMSRSLVQE STGGNTQIAG 420
  421 AVSSLFILLI IVKLGELFRD LPKAVLAAVI IVNLKGMMKQ FSDICSLWKA NRVDLLIWLV 480
  481 TFVATILLNL DIGLAVSIVF SLLLVVIRMQ LPHYSVLGQV PDTDIYRDVA EYSGAKEVPG 540
  541 VKVFRSSATM YFANAELYSD SLKKKCGVDV DRLITQKKKR IKKQEMKIKR MNKAKKSQKQ 600
  601 AASSKISSVS VNVNTNFEDI KSNDVEGSEA KVHQGEELED VVASNQEDAK PPIMTSLKAL 660
  661 GLPQPDFHSL ILDLSTVSFV DTVCIKSLKN IFRDFREIEV EVYIAACYSP VVTQLEAGHF 720
  721 FDESITKQHV FASVHDAVTF ALHHRKSGPK SPVLATKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle