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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62654280
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHFVAALS VVSFLSFFSS PRLRMDEELY SRQLYVLGLP AMQRIREAKV LLCGLQGLGA  60
   61 EVAKNLVLMG VGSLTLHDPH PTCWADLAAQ FFLSEESLGR SRAEASQPQL AQLNEAVQIS 120
  121 VHRGDITEDL VRGFQVVVLT DSKLEDQLNM GALCHKNRVY FLMAETRGLV GRLFCDFGED 180
  181 FTVVDPTEVE PTSAAIQDIS QGSPGIVTLR GGSKRPSFYD GDLVMFSDIE GMVELNSHSP 240
  241 QPVRVQKDGS LEIGDTTTFS RYLRGGVVTE VKRPKTVKHK PLDIALLQPC MVVQNTQEIQ 300
  301 RAHCLHQTFH ALHKFQQLHG RLPKPWDPDD AETVVWLAQD LEPLKGAKEE SLDEALLRTI 360
  361 ALSSAGSLSP MAAILGGVAA QEVLKAVSGK FMPLDQWLYF DALECLPEDE TLLPSPEDCH 420
  421 PRNCRYDGQI AVFGTGFQEK LSYKHYLLVG AGAIGCEMLK GFALVGLGVR DNGGVTIADM 480
  481 DHVERSNLSR QFLFRPKDTG RPKAEVAAEA AHRLNPDLQV TSHTCPLDPT TEDIYDDDFF 540
  541 SRVDGVVAAL DSFQARHYVA ARCTHYLKPL LEAGTQGTRG SASVFVPYVT EVYKGPTSAE 600
  601 EAPYPVCTLR HFPSTVEHSL QWAQDEFEGL FRLSAETIND YQQTCTSSLL GTDGTGILAL 660
  661 LQQVMGVLRT RPQTWQDCVV WALGHWQLCF RDNIVELLRK FPSDKVLEDG TLFWSGSKKC 720
  721 PHPLQFDPNQ DTHFLYVLAA ANLYARMHGL PGSQSQTALR ELLTLTLLQE PDSMPQNLFS 780
  781 AEFGQEQLKE LQETLDDWNK GPPLKPVLFG KDDSSNFHED FVVAATDLRC QNYGILPVNR 840
  841 ARIKQTIGRI IPAIATSTAV VAGLLGLELY KVVSGPRPLG TFRHSYLHLA ENHFIRSAPS 900
  901 APAMQSFHHL EWTCWHRLTV PAGQPERTLE SLLAHLQEEH GLTVRMLLHD QALLYSSGWP 960
  961 FEKQAQHLGL RVTELVQQVT GQKPKPGLRV LVFELSCEGE DDEMAFPPLH YEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle