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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109484668, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGPQQSLPC IAPLLTTVEE TLSTVSARVR GHIPEWLNGY LLRVGPGKFE FGKDRYNHWF  60
   61 DGMALLHQFK MEKGTVTYKS KFLQSDTYKA NSAGDRIVIS EFGTLALPDP CKSIFERFMS 120
  121 RFEPPTMTDN TSVNFVQYKG DYYMSTETNF MNKVDIETLE RTEKVDWSKF VAVNGATAHP 180
  181 HYDPDGTAYN MGNTYGPRGS CYNIIRVPPK KKEPGETIHG AQVVCSIASS EKMKPSYYHS 240
  241 FGMTKNYIVF VEQPLKMKLW KIITSKIRGK SFADGISWEP QYNTRFHVVD KHTGQPLPGV 300
  301 YYSKPFLTYH QINAFEDQGC IVIDLCCEDD GRSLDIYQLQ NLRKAGEELD QVYKAKAKSF 360
  361 PRRFVLPLDI SVGAPEGENL RPLPYSSASV VKQGDREIWC SPENLHQEDL EEEGGIEFPQ 420
  421 INYGRFSGKK YSFFYGCGFR HLVGDSLIKV DVVNKTLRVW REEGCYPSEP VFVPVPGADE 480
  481 EDSGAILSVV ITPNQGESNF LLVLDAKNFT ELGRAEVPVR MPYGFHGTFV PI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle