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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62652741
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRSQRLTR YSQDDNDGSS SSGASSVAGG QSTVFKDSPL RTLKRKSSNM KRLSPAPQLP  60
   61 PPSDSHTSYY SESVVRESYI GSPRAVSLAR SALLDDHLHS EPYWSGDLRG RRRRGTGGSE 120
  121 SSKANGLTME NKASEDFFGS SSGYSSEDDL AGYTDSDQHS SGSGLRSAAS RAGSFVWTLV 180
  181 TLPGRLFGLL YWWVGTTWYR LTTAASLLDV FVLTRHFSPN LKSFLWFLLL LLLLTGLTYG 240
  241 AWHFYPLGLQ TLQPAVASWW AAKESRRQPE VWDTRDASSH LQAEQRILSR VHSLERRLEA 300
  301 LAAEFSSNWQ KEAIRLERLE LRQGAAGHGG GSSLSHEDAL SLLEGLVSRR EAALKEDLRR 360
  361 DTVARIQEEL ATLRAEHHQD SEDLFKKIVQ ASQESEARVQ QLKTEWRSMT QEAFQESSVK 420
  421 ELERLEAQLA GLRQELAALT LKQNSVADEV GLLPQKIQAA RADVESQFPD WISQFLLRDR 480
  481 GARSGLLQRD EMHAQLQELE NKILANMAEM QGKSAREAAA SLGQTLQKEG IVGVTEEQVH 540
  541 RIVKQALQRY SEDRIGMVDY ALESGGASVI STRCSETYET KTALLSLFGI PLWYHSQSPR 600
  601 VILQPDVHPG NCWAFQGPQG FAVVRLSARI RPTAVTLEHV PKALSPNSTI SSAPKDFAIF 660
  661 GFDEDLQQEG TLLGTFAYDQ DGEPIQTFYF QASKMATYQV VELRILTNWG HPEYTCIYRF 720
  721 RVHGEPAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle