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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62652267, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFVSEGSP GSLPVLAAAA RARGRAELLI STVGPEECVV PFLTRPKVPV LQLDSGNYLF  60
   61 SASAICRYFF LLCGWEQDDL TNQWLEWEAT ELQPVLSAAL YCLVVQGKKG EDVLGPLRRV 120
  121 LTHIDHSLSR QNCPFLAGDT ESLADIVLWG ALYPLLQDPA YLPEELGALQ SWFQTLSTQE 180
  181 PCQRAAETVL KQQGVLALRP YLQKQPQPQP LPPEGRAVSN EPEEEELATL SEEDIIAAVA 240
  241 AWEKGLENLP PLQPQQHPVL PVPGERNVLI TSALPYVNNV PHLGNIIGCV LSADVFARYS 300
  301 RLRQWNTLYL CGTDEYGTAT ETKAMEEGLT PQEICDKYHA IHVDIYRWFN ISFDTFGRTT 360
  361 TPLQTKITQD IFQRLLTRGF VLQDTVEQLR CEQCARFLAD RFVEGVCPFC GYEEARGDQC 420
  421 DKCGKLINAI ELKRPQCKVC RSHPVVKSSK HLFLDLPKLE KRLEDWLGKT MPGSDWTPNA 480
  481 RFIIRSWLRD GLKPRCITRD LKWGTPVPLE GFEDKVFYVW FDATIGYLSI TANYTDQWER 540
  541 WWKNPEQVDL YQFMAKDNVP FHGLVFPCSA LGAEDNYTLV KNLIATEYLN YEDGKFSKSR 600
  601 GIGVFGDMAQ DTGIPADIWR FYLLYIRPEG QDSAFSWTDL LIKNNSELLN NLGNFINRAG 660
  661 MFVSKFFGGC VPEMVLTHDD RRLVAHVSWE LQRYHQLLEK VRIRDALRSI LTISRHGNQY 720
  721 IQVNEPWKRI KGDEMDRQRA GTVTGMAVNI AALLSVMLQP YMPTVSSTIQ TQLQLPEAAC 780
  781 RILATSFICT LPAGHRIGTV SPLFQKLEND QIENLRQRFG GGQAKGSPKP AVVEAVTTAG 840
  841 SQDIQVLVDE VTKQGNIVRE LKAQKADKNQ VAAEVAKLLD LKKQLALAEG KPIETPKGKK 900
  901 KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle