YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157817394, gi...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.96
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGTLLLLL LLFLRCATPD SAENSSRPGV PTGSQNRTSG SLPDTGSAML RLFYVITGLC  60
   61 GLVSLYFLIR AFRLKKPQRR RYGLLTNTEE HEEMASQDSE EETVFETRNL R

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	49	0.92
Transmembrane Helix	50	72	0.87
Cytoplasmic	73	111	0.95