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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149044213, gi...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFPVTTQGS QQTQPPQRHY GITSPISLAA PKETDCLLTQ KLIETLKPFG VFEEEEELQR  60
   61 RILILGKLNN LVKEWIREIS ESKNLPQSVI ENVGGKIFTF GSYRLGVHTK GADIDALCVA 120
  121 PRHVDRSDFF TSFYDKLKLQ EEVKDLRAVE EAFVPVIKLC FDGIEIDILF ARLALQTIPE 180
  181 DLDLRDDSLL KNLDIRCIRS LNGCRVTDEI LHLVPNIDNF RLTLRAIKLW AKRHNIYSNI 240
  241 LGFLGGVSWA MLVARTCQLY PNAIASTLVH KFFLVFSKWE WPNPVLLKQP EECNLNLPVW 300
  301 DPRVNPSDRY HLMPIITPAY PQQNSTYNVS VSTRMVMVEE FKQGLAITDE ILLSKAEWSK 360
  361 LFEAPNFFQK YKHYIVLLAS APTEKQRLEW VGLVESKIRI LVGSLEKNEF ITLAHVNPQS 420
  421 FPAPKESPDR EEFRTMWVIG LVFKKTENSE NLSVDLTYDI QSFTDTVYRQ AINSKMFELD 480
  481 MKIAAMHVKR KQLHQLLPSH VLQKRKKHST EGVKLAALND SSLDLSMDSD NSMSVPSPTS 540
  541 AMKTSPLNSS GSSQGRNSPA PAVTAASVTS IQASEVSVPQ ANSSESPGGP SSESIPQTAT 600
  601 QPAISPPPKP TVSRVVSSTR LVNPSPRPSG NAATKVPNPI VGVKRTSSPH KEESPKKTKT 660
  661 EEDETSEDAN CLALSGHDKT ETKEQVGMET SAAPSEAAPA SASLVASQKT SSTDLSDIPA 720
  721 LPANPIPVIK NSIKLRLNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle