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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157822195, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALPAPRSL LLFLQVLWLA LAQIRGPPGE PGLPGPPGPP GVPGSDGIDG DKGPPGKVGP  60
   61 PGSKGEPGKP GPDGPDGKPG IDGLMGAKGE PGPMGTPGIK GQPGLPGPPG LPGPGFAGPP 120
  121 GPPGPVGLPG EIGTPGPKGD PGPEGPSGPP GPPGKPGRPG TIQGLEGSAD FLCPTNCPAG 180
  181 VKGPQGLQGV KGHPGKRGIL GDPGRQGKPG PKGDVGASGE QGIPGPPGPQ GIRGYPGMAG 240
  241 PKGEMGPRGY KGMVGSIGAA GPPGEEGPRG PPGRAGEKGD VGSQGARGPQ GITGPKGTTG 300
  301 PPGIDGKDGT PGIPGMKGSA GQVGRPGSPG HQGLAGVPGQ PGTKGGPGDK GEPGQQGFPG 360
  361 ISGPPGKEGE PGPRGETGPQ GIMGEKGDQG ERGPVGQPGP QGRQGPKGEQ GSPGIPGPQG 420
  421 LPGIKGDKGS PGKTGPRGGV GDPGVAGLPG EKGEKGLSGE PGLKGQQGVR GEPGYPGPSG 480
  481 DAGAPGVQGY PGLPGPRGLV GDRGVPGQPG RQGVVGRAAS DQHIVDVVLK MIQEQLAEVA 540
  541 VSAKREALGA TGMVGLPGPP GPPGYPGKQG PNGHPGPRGI PGIVGAVGQI GNTGPKGKRG 600
  601 EKGDQGEMGR GHPGMPGPPG IPGLPGRPGQ AINGKDGDRG SPGAPGEAGR PGRPGPVGLP 660
  661 GFCEPAACLG ASAYTSARLT EPGSIKGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle