YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109475990, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPMVSRWT AGLWHGRTRT SWCAAAALRD SRVVLRRAAL RTEPARLRSG VLLPLAEPLG  60
   61 SPGRAQIPVC WRPCVCLLHT QVGKPEDGRL IYTGNLARTV FGVKCFSYST SVVSLAFLPY 120
  121 LLSQSNMMFG SLPLQVLFYG VMGSFTVITP TLLHFLTKGY VIRLYHEATT DTYRAITYNV 180
  181 VLSESSTVFH QGDVTVPESA HIFTTFYAKT KSLLVNPALF VNPEDYNHLM GYDKPFTFDM 240
  241 EEVNEKKLHE GEK

Type	Start	End	Confidence
Cytoplasmic	1	99	0.96
Transmembrane Helix	100	122	0.85
Non-Cytoplasmic	123	135	0.82
Transmembrane Helix	136	156	0.92
Cytoplasmic	157	253	0.97