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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109473306, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQAAVAVAE VTQLLCAAGG ALELAELRRR LRTSLGADAL ERLLRDRGRF VVASREGTGP  60
   61 ATAAAAASER VVVAVSSLRL CRAHQGPKQG CTGLCAQLHL CKFLIYGNCK FLRTGKNCRN 120
  121 GHNLKTDHNL SVLRTHGIDH LTYTELCQLL LQNDPSLLPD ICLHYNKGDG HFGSCSFQKQ 180
  181 CIKLHICQYF LQGECKFGTS CKRSHEFTNS ENLEKLEKLG LSSDLVSRLL STYRNAYDIK 240
  241 NKGSALSKVS SSPAGPQGTS ERKDSSVSPG TLSQEESEQI CLYHIRKSCS FQDKCHRVHF 300
  301 HLPYRWQFLD GGEWKDLDNM ELIENAYCNP SKDRIVYTES AAGFHFDNLD FNSMKLGHTL 360
  361 ARRLSTASSV TKPPHFILTT EWAWYWMDEF GSWQEYGRQG TGHPVTTISS SDVEKAYLSF 420
  421 CVPGADAQAA ILKFQAGKHN YELDFKAFLQ KNLVYGTVRK VCRRPKYVSP QDVQMKQSCN 480
  481 TKLHGTKSIP DYWDPAALPD LGFKRITLSS SSEEYQKVWN LFNRTLPFYF VQKIERIQNL 540
  541 GLWEVYQWQK GQMQKQNGGK EVDERQLFHG TSTNFVDAIC QQNFDWRVCG LHGTSYGKGS 600
  601 YFARDAAYSH HYSKSDTHSH TMFLARVLVG DFVRGSTSFV RPPAKEGQSN AFYDSCVNSM 660
  661 SDPTIFVVFE KHQVYPEYLI QYSTSSKPPA GPSIFVALGN LFTSRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle