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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157822837, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSSDRLAGA GSGGAVVTVA FTNARDCFLH LPRHLVAQLH LLQNQAIEVT GDHQPTYLSW  60
   61 VEGRHFNDQS ENVAEINRQV GQKLGLSSGD QVFLRPCSHV VSCQQVEVEP LSADDWEILE 120
  121 LHAISLEEHL LDQIRIVFPK AIVPIWVDQQ TYIFIQIVAL MPTAPYGRLE TNTKLLIQPK 180
  181 TRQAKESTFP KEGDARGQAH NYGREQKGTV KELQTKQLHK NTEAVPVSNG RNPEVPGDSV 240
  241 KPRWWAVLGS MFSFGPDNKQ ESAWGSLELG AFKNMQSQTV PLDSIFRVCQ VQPPSVHNTP 300
  301 ANSVFHKHCT VHVFPWDQEY FDVEPSFTVV YGKLVKLHSP KQQQDKSKQG VLLPEKEKQL 360
  361 SQSPGHKRIG SDGSEEAAET CVLKVVWNGL EELKNATEFT KSLEPLHHGK VWIPADLRKR 420
  421 LNIEMHAVVR ITPLETTPVI PRALRLQPAE NLPRDVSEEE VKAVFSSWLQ ESATTMFPLI 480
  481 ISKQECIKLE IKDGLKEFSL SIVHSQEKEK EQGRTVFVLS PILLQKISVQ VLLEPMIGEH 540
  541 SEEIDILLPS LTLSSLGGVS SLSVSAMEHI THSLLGRPLS RQLMALVAGL RNGALLITGG 600
  601 KGSGKSTLAK AICKEAHDAL DAHVEMVDCK ALRGKRLESI QKALEVAFSE AAWRQPSVIL 660
  661 LDDLDLIAGL PSTPEHEHSP EAVQSQRLAH ALNNMIKEFV SMGSLVALIA TSQLQHSLHP 720
  721 SLVSAQGVHT FQCIQHIQPP DQEQRCEILH SVVKNKLGCD ISKSPDLDLK CIAKETEAFV 780
  781 ARDFTVLVDR AIHSSLSRQQ NPTREGLTLT TADFQKALRG FLPASLRNVN LHKPRDLGWD 840
  841 KIGGLHEVRQ ILMDTIQLPA KYPELFANLP IRQRTGILLY GPPGTGKTLL AGVVARESGM 900
  901 NFISIQGPEL LSKYIGASEQ AVRDVFIRAQ AAKPCILFFD EFESIAPRRG HDNTGVTDRV 960
  961 VNQLLTQLDG VEGLQGVYVL AATSRPDLID PALLRPGRLD KCVYCPPPDQ VSRLEILTVL1020
 1021 SKSLPLADDV DLQHVASVTE SFTGADLKAL LYNAQLEALQ GRLLPGGLHD GGSSSDSDLS1080
 1081 LSSMVFLNHS SGSDDSAGDG ECGLDQSLVS LEMSEILPDE SKFNMYRLYF GSSYESELGN1140
 1141 GASCDLSSHC LSAPSSMTQD LPATPGKDPL FTQHPVFRTP SQEGSQDLTQ EQRDQLRADI1200
 1201 SIIKGRYQSQ SGEDESLNQP GPIKTSFAIS QAHLMTALAH TRPSINEDEG KEFAELYENF1260
 1261 QNPKKRKNQS GTVFRTGQKV TLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle