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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149046519, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSSLLAVL RPMLPLILGL SLGCSLSLLR VSWIQGEGED PCVEAVGKPG GPQNPDLKHG  60
   61 LDQSDEDFKP RIVPYYRDPN KHYKKVLRTR YIQTELGSRE RLLVAVLTSR ATLSTLAVAV 120
  121 NRTVAHHFPR LLYFTGQRGA RAPAGMQVVS HGDERPAWLM SETLRHLHTH FGADYDWFFI 180
  181 MQDDTYVQAP RLAALAGHLS INQDLYLGHA EEFIGTGEQA RYCHGGFGYL LSRSLLLRLR 240
  241 PHLDGCRGDI LSARPDEWLG RCLIDTLGIG CVSQHQGQQY RSFELAKNRD PEKEGSPAFL 300
  301 SAFTVHPVSE GTLMYRLHKR FSALELERAY KEIEQLQAQI RNLTVLTPEG EAGLSWPVGL 360
  361 PAPFIPHSRF EVLGWDYFTE QHTFACADGA PKCPLQGASR ADVGDAVDTA LEQLNRRYQP 420
  421 RLRFQKQRLL NGYRRFDPAR GMEYTLDLLL EAVTQRGHRR SLARRVSLLR PLSKVEILPM 480
  481 PYVTEATRVQ LVLPILVAEA PAALAFLEAF AASVLEPREH ALLTLLLVYG PREGRGGPDP 540
  541 FLGVKAAAAE LERRYPGTRL AWLAVRAEAP SQVRLMDVIS KKHPVDTLFF LTTVWTRPGS 600
  601 EVLNRCRMNA ISGWQAFFPV HFQEFNPVLS PQRSPPGVPG AGPDPPSPGV DPSRGAPVGG 660
  661 RFDRQASAEG CFYNADYLAA RARLAGELAG QEEEEALEGL EVMDVFLRFS GLHLFRAVEP 720
  721 GLVQKFSLRD CSPRLSEELY HRCRLSNLEG LGARTQLAMA LFEQEQANST 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle