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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149023007, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPGSRSACR WALLLLAVLW PQRAAGSGIF QLRLQEFANE RGMLANGRPC EPGCRTFFRI  60
   61 CLKHYQATFS EGPCTFGNVS TPVLGTNSFV IRDKNSGSGR NPLQLPFNFT WPGTFSLNIQ 120
  121 AWHTPGDDLR PETSPGNSLI SQIIIQGSLA VGKNWKSDEQ NNTLTRLRYS YRVVCSDNYY 180
  181 GDSCSRLCKK RDDHFGHYEC QPDGSLSCLP GWTGKYCDQP ICLSGCHEQN GYCSKPDECN 240
  241 CRPGWQGPLC NECIPHNGCR HGTCTIPWQC ACDEGWGGLF CDQDLNYCTH HSPCKNGSTC 300
  301 SNSGPRGYTC TCLPGYTGEH CELELSKCAS NPCRNGGSCK DHENSYHCLC PPGYYGQHCE 360
  361 HSTLTCADSP CFNGGSCRER NQGASYACEC PPNFTGSNCE KKVDRCTSNP CANGGQCLNR 420
  421 GPSRTCRCRP GFTGTHCELH ISDCARSPCA HGGTCHDLEN GPVCTCPAGF SGRRCEVRIT 480
  481 NDACASGPCF NGATCYTGLS PNNFVCNCPY GFVGSRCEFP VGLPPSFPWV AVSLGVGLVV 540
  541 LLVLLVMVAV AVRQLRLRRP DDDSREAMNN LSDFQKDNLI PAAQLKNTNQ KKELEVDCGL 600
  601 DKSNCGKLQN HTLDYNLAPG FLGRGSTPGK YPHSDKSLGE KVPLRLHSEK PACRISAICS 660
  661 PRDSMYQSVC LISEERNECV IATEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle