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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114145538, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRDSAEPL PPLFPQARVW PGKMVAMGAL AGFWVLSLIT YGYLSWGQDL EEEGSLRAQV  60
   61 EERPEAGTAV TSQPHLIFIL ADDQGFRDVG YHGSEIKTPT LDKLAAEGVK LENYYVQPIC 120
  121 TPSRSQFITG KYQIHTGLQH SIIRPTQPNC LPLDNATLPQ KLKEVGYSTH MVGKWHLGFY 180
  181 RKDCMPTKRG FDTFFGSLLG SGDYYTHYKC DSPGVCGYDL YENDNAAWDY DNGIYSTQMY 240
  241 TQRVQQILAS HDPTKPLFLY VAYQAVHSPL QAPGRYFEHY RSIININRRR YAAMLSCLDE 300
  301 AIHNVTLALK RYGFYNNSII IYSSDNGGQP TAGGSNWPLR GSKGTYWEGG IRAVGFVHSP 360
  361 LLKNKGTVCK ELVHITDWYP TLISLAEGQI DEDIQLDGYD IWETISEGLR SPRVDILHNI 420
  421 DPIYTKAKNG SWAAGYGIWN TAIQSAIRVQ HWKLLTGNPG YSDWVPPQAF SNLGPNRWHN 480
  481 ERITLSTGKS IWLFNITADP YERVDLSSRY PGIVKKLLRR LSQFNKTAVP VRYPPKDPRS 540
  541 NPRLNGGVWG PWYKEESKKK KTNKTKAKKM QKKSKARTRK QRAARSSTKC HPRVTTG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle