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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109467582, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLIVKFRRS FRTLIVLLAT FCLVSIVISA YFLYSGYKQE MTLVETTAEA ECADIKNLPY  60
   61 RSIELKTIKP IDTSKTDPTV LLFVESQYSQ LGQDIIAILE SSRFQYQMVI APGKGDIPPL 120
  121 TDSGKGKYTL IIYENILKYV SMDSWNRELL EKYCIEYSVS IIGFHKANEN SLPTTQLKGF 180
  181 PLNLFNNVAL KDCSVNPQSP LLHITKGPKV EKGPLPGEDW TIFQYNHSTY QPVLLTELQT 240
  241 EKSLSFLSSQ TLYATIIQDL GLHDGIQRVL FGNNLNFWLH KLIFIDAISF LSGKRLTLSL 300
  301 DRYILVDIDD IFVGKEGTRM NVKDVKALLE TQNLLRTQVA NFTFNLGFSG KFYHTGTEEE 360
  361 DAGDDLLLRS VDEFWWFPHM WSHMQPHLFH NESSLVEQMI LNKEFALEHG IPINLGYAVA 420
  421 PHHSGVYPVH IQLYAAWKKV WGIQVTSTEE YPHLKPARYR KGFIHNNIMV LPRQTCGLFT 480
  481 HTIFYKEYPG GPQELDKSIK GGELFLTILL NPISIFMTHL SNYGNDRLGL YTFVNLANFV 540
  541 HSWTNLKLQT LPPVQLAHKY FELFPEQKDP LWQNPCDDKR HKDIWSREKT CDHLPKFLVI 600
  601 GPQKTGTTAL YLFLLMHPSI VSNLPSPKTF EEVQFFNGNN YHKGIEWYMD FFPTPSNITS 660
  661 DFLFEKSANY FHSEEAPKRA ASLVPKAKII TILIDPSDRA YSWYQHQRSH EDPAALRFNF 720
  721 YEVITTGHWA PPDLKTLQRR CLVPGWYAVH IERWLAYFST SQLLIIDGQQ LRSDPATVMD 780
  781 EVQKFLGVTP HYNYSEALTF DPQKGFWCQL LEGGKTKCLG KSKGRRYPPM DPESRTFLSS 840
  841 YYRDHNVELS KLLHRLGQPL PSWLRQELQK VR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle