YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62643834, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCRLLAFSA LSLVACGSPT IVSRKVWGAS SLTCRVPLSL PVPYLIIEQV TRMQCQDQTS  60
   61 CSQVLRVLHS HYVHNKGWCD VAFNFLVGND GKVYEGVGWH VQGLHTQGYN NVSLGIAFFG 120
  121 SKIGSSPSPA ALSATEDLIF FAILNGYLSP KYIQPFLLKE ETCLVPQHSE IPKKACPNII 180
  181 PRTAWEARET HCSQMNLPAK FVIIIHTAGE SCNESADCLI RVRDTQSFHM DKQDFCDIAY 240
  241 HFLVGQDGVV YEGVGWTIEG SHTYGYNDIA LGIAFMGNFV EKPPNEASLE AAQSLIQCAV 300
  301 AMGYLASNYL LMGHSDVSNI LSPGQALYNI IKTWPHFKH

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	339	0.99