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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62643775
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPSPSDSSR SLTSRPSTRG LTHSRLHRPW LQALLTLGLP QVLLGILVVT FSMVASSVTT  60
   61 TESIKSSSPS XXXFSLAFSG LVGIVSWKRP FTLVISFFSL LSVLCVMLSM AGSVLSCKNA 120
  121 QLARDFRECS MEGKVCVCCP PIPLHRPCPE WGQELKVAFN STCDEARGAL KNLLFSVCGL 180
  181 TICAAIICTL SAIVCCVQIF SLDLVHVQLA PERSVSGPLG SLACTSSPPA PLLHTMLDLE 240
  241 EFVPPVPPPP YYPPEYTCSS ETDAQSITYN GSMDSPVPLY PTDCPPSYEA VMGLRRDSQA 300
  301 TLFDPQLHDG SCVCERVPSI VDVSMDSGSL VLSAIGDLPG GSSPSEDSCL LELQGSVRSV 360
  361 DYVLFRSIQR SRAGYCLSLD CGLRGPFEDS PLPRRPPRAA RSYSCSAPEA PPPLGAPTAA 420
  421 RSCHRLEGWP PWVGPCFPEL RRRVPRGGSR STAPPPARAP VRRFSDSSGS LTPPGHRPPH 480
  481 RTPPPPLLLP RSHSDPGITT SSDIADFRDL YTKVLEEEAA SISSADTGLC SEACLFRLAR 540
  541 CPSPKLLRAH SAEKRRPVPT FQKVPLPSGP APAHSLGDLK GSWPGRGLVT RFLQLSRKSP 600
  601 DPAGTGAHGH KQVRRSPWGR PGRESLHLRS CGDLSSGSSL RRLLSARRLE HGIRPHSLSL 660
  661 NGGSRETGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle