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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62643265, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYVTMMMTDQ IPLELPPLLN GEVAMMPHLV NGEAAQQVIL VQVNPGETFT IRAEDGTLQC  60
   61 IQGPAEVPMM SPNGSIPPIH VPPGYISQVI EDSTGVRRVV VTPQSPECYP PSYPSAMSPT 120
  121 HHLPPYLTHH PHFIQNSHTA YYPPVTVPGD MPPQFFPQPH LPPTIYSEQE IIPLYGMSSY 180
  181 ITREDQYSKP PHKKLKDRQI DRQNRLNSPP STIYKNSCAT MYNGYGKGHS GGSSGGGGGG 240
  241 SGGGPGIKKT ERRARSSPKS SDSDLQEYEL EVRRVQDILS GIEKPQVSNI QARAVVLSWA 300
  301 PPVGLPCGPH GGLSFPYSYE VALSDKGRDG KYKIIYSGEE LECNLKDLRP ATDYHVRVYA 360
  361 MYNSVKGSCS EPVSFTTHSC APECPFPPKL AHRSKSSLTL QWKAPIDNGS KITSYLLEWD 420
  421 EGKRNSGFRQ CFFGGQKHCK LTKLCPAMGY TFRLAARNDI GTSGYSQEVV CYTLGNIPQM 480
  481 PSAPRLVRAG VTWITLQWSR PEGCSPEEVI TYTLDIQEDE NDNHFHPRYT GEDLTCTVKN 540
  541 LKRSTQYKFR LTASNTEGKS CPSEVLVCTT SPDRPGPPTR PLLKGPVTSH GFSVKWDAPK 600
  601 DNGGSEILKY LLEITDGASE AGQWEVAYSG SATEYVFTHL KPGTLYKLRA CCIGTGGHSQ 660
  661 CSESLPVRTL SLAPGQCRPP RVLGRPKHKE VHLEWDVPAS EGGCEVSEYS VEMTEPEEVA 720
  721 SEVYHGPELE CTVGNLLPGT VYRFRVRALN DGGYGPYSDV SEITTAAGPP GQCRAPCVSF 780
  781 TPDGCVLVGW ESPESPGADI SEFRLEWGED EESLELIYHG PDTCFEIRDL LPAAQYCCRL 840
  841 QAFNPAGAGP YSELVHCQTP ASAPDPVSTL CVLEEEPLSA HLDSPSVCLV LTWEEPCSNG 900
  901 SEIIAYNIDL GDTCITVGNT TTHVLKNLLP ETTYRIRIQA VNDIGDGPFS QFIKAKTRPL 960
  961 PPSPPRLECA ASGPQSLKLK WGDSNSKIHA AHDMVYTLQL EDRNKRFISI YRGPSHTYKV1020
 1021 QRLTEFTCYS FRIQATSEAG EGPFSDTYTF STTKSVPPTL KAPRVTQLEG NSCEIFWETV1080
 1081 PPMKGDPVNY VLQVLVGRES EYKQVYKGEE ATFQISGLQS NTDYRFRVCA CRRCVDTSQE1140
 1141 LSGAFSPSAA FVLQQREVLL TGDLGGMDDA KMKGVMPTDE QFAALIVLGF ATLSILFAFI1200
 1201 LQYFLMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle