YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|81158018, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPHRTCSS PATLLCIVLL GLQYVDALRS PPPRPNFLII MADDLGIGDL GCYGNTSIRT  60
   61 PNIDRLAEDG VRLTQYLAAE SVCTPSRAAF LTGRYPIRSG MTSGNGHRVL QWAAGAGGLP 120
  121 PKEITFARIL QGQGYVTGLV GKWHLGLSCR TVSDLCHHPL NHGFHHFLGL PLGMMGDCAG 180
  181 AEPSEKRAGL ERRLRGAGRA LAAVAVAIAA LAWGRGRGLA PACWAPWAAI ALGAVAAIFE 240
  241 AGSYVVGGAV ARYDCFLMRN ATVTQQPLQL DHVTPLLLRE AKDFLRRHRH APFLLFLSLL 300
  301 HTHTPLVTSP EFRGRSAHGR YGDNVEEMDW VVGQILEVLE HEGLTDSTLV HFTSDNGAWL 360
  361 EAQAGGEQLG GSNGVFRGGK GMGGWEGGIR VPGVFRWPGV LPRGRVLDQP VSLMDVFPTV 420
  421 VRLGGGVLPS DREIDGRDLL PLLRGETWHS AHEVLLHYCE VFLHAVRWVQ RDSGQVWKAH 480
  481 FVTPTFDPLG SGSCSGAGGA AAVCPCVGKV EEHDPPLLFE LTSDPGEVRP LRAPAKMSEA 540
  541 PNLTAAITSE AVTAAMATAA RVRQEYDMLR PTAGHVPQQM GSLYNLWLPW LQPCCGHFPA 600
  601 CACDLEGGSR K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle