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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62642331
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWPPPPTFS VFLLLLLSQV PSSRPQSPGT KKLRLVGPAN RPEEGRLEVL HQGQWGTVCD  60
   61 DDFALQEATV ACRQLGFESA LTWAHSAKFG QGEGPIWLDN VRCLGTEDTL DQCGSNGWGV 120
  121 SDCRHSEDVG VVCHPRRQQG YHSEKVSNAL GPQGRRLEEV RLKPILASAK RHSPVTEGAV 180
  181 EVRYEGHWRQ VCDQGWTMNN SRVVCGMLGF PSQAPVNSHY YRKVWNLKMK DPKSRLNGLT 240
  241 KKNSFWIHRV DCLGTEPHLA KCQVQVAPGR GKLRPACPGG MHAVVNCVAG PHFQRQKPKP 300
  301 KRKESGAEEL KVRLRSGAQV GEGRVEVLMN RQWGTVCDHR WNLISASVVC RQLGFGSARE 360
  361 ALFGAQLGQG LGPIHLSEVR CRGYEQTIGD CLALEGSQNG CQHANDAAVR CNIPDMGFQN 420
  421 KVRLAGGRNS EEGVVEVQVE VNGVPRWGTV CSDHWGLTEA MVTCRQLGLG FANFAIKDTW 480
  481 YWQGTPEAKE VVMSGVRCSG TEMALQQCQR HGPVHCSHGS GRFSAGVACM NSAPDLVMNA 540
  541 QLVQETAYLE DRPLSMLYCA HEENCLSKSA DHMDWPYGHR RLLRFSSQIY NLGRADFRPK 600
  601 AGRHSWIWHQ CHRHYHSIEV FTHYDLLTLN GSKVAEGHKA SFCLEDTNCP SGVQRRYACA 660
  661 NFGEQGVAVG CWDTYRHDID CQWVDITDVS PGDYIFQVVV NPTNDVAESD FSNNMIRCRC 720
  721 KYDGQRVWLH NCHTGDPYRP NAELSLEQEQ RLRNNLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle