YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109463454, gi...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSPALRVRQ RVLEGPMRAG SVSRPVATKT RLRRSDSTSG IGSGGAARRD MRLSWILTVL  60
   61 SICLSALVTA TGAEGKRKLQ IGVKKRVDHC PIKSRKGDVL HMHYTGKLED GTEFDSSLPQ 120
  121 NQPFVFSLGT GQVIKGWDQG LLGMCEGEKR KLVIPSELGY GERGAPPKIP GGATLVFEVE 180
  181 LLKIERRSEL

Type	Start	End	Confidence
Cytoplasmic	1	52	0.59
Transmembrane Helix	53	73	0.63
Non-Cytoplasmic	74	190	0.92