YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71891871, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRNFFSFVI CVIVILFFSL FTIEEGHKGI ILRFGKVLRD ADNNSLIYNP GLHIKIPFIE  60
   61 TIKILDSRIQ TMDNQADRFV TMEKKDLIID SYVKWRISDL SRYYLATGGG DISQAEVLIK 120
  121 RKFSDRLRSE LGRLNVQGIV TDSRNKLMTD VRASLNHGTS GEEASGFHCN HDIKKFHFHS 180
  181 KNYDSSMQEQ YRVSDLVNPN SMAALGIEIV DVRIKQINLP TEVSDAIYQR MRAERDAVAR 240
  241 RHRSQGREEA EKLRATADYE VTRTLAEAKR QSLIIRGEAD AETAKLYATT FNEDPSFYAL 300
  301 VRTLRAYENS FKKNNNDLMV LSAETDFLRF MKSPKSTTGL NN

Type	Start	End	Confidence
Signal Peptide	1	22	0.63
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	342	0.92