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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83636798, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVRMSETNS TGRLDTGLAA LVMLARFHQV AADPAQIQHH FGTHENAFTE QALIRASRHL  60
   61 KLKAKAFTSS WEKLAHIALP AIAATQDGHY VVLARAAEDK VLIQDPAGQG PQTLSKEEFM 120
  121 ERWSGRLILI TKRSVLPGMS GKFDISWFIP AILKYKSLLR DVIIASFFIQ LFALITPLFF 180
  181 QVIIDKVLVH KGLTTLDVLA FGLIVLSIFD VVLNGLRNYV FSHTTNRVDV TLGSKLYHHL 240
  241 IHLPISYFLM RQVGNTVARV RELDTIRNFI TSSALTLVID LFFTIVFFVV MYFYSPTLTW 300
  301 VVLGSIPFYV ALSVYITPIL RNRLDEKFKR GAENQAFLTE SVSGMETVKA MAVEPQMQRR 360
  361 WEENLAAYVA ASFKANNLGN IASQSAQLIN KIVTVLILWI GATLVMQNEL SIGQLIAFNM 420
  421 IAGRVSGPIL KLVQLWQDFQ QAGISIARLG DILNTPTEPG HNPNRTTLQQ IQGQVSLENV 480
  481 SFRYSPDQPH ILRNLSLDVK PGEVIGIVGR SGSGKSTLTK LVQRLYVPEA GRVLVDGVDL 540
  541 AQMEPAWLRR QVGVVLQENR LFNRSVKDNI ALVDPSLPME RVIQAAKLAG AHEFIVQLPQ 600
  601 GYDTIVGEQG ASLSGGQRQR IAIARALICN PRILIFDEAT SALDYESERV IQENMRHMCR 660
  661 GRTVFIIAHR LSTVRQADRI IVVDKGEIVE SGNHDQLLQQ GGYYTKLYSY QNHTPAIRKV 720
  721 ETTAPADAVI GNAEKGGAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle