YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83648725, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHEYWTEFLT VALAHLLAVA SPGPDFAVVM RQSLCRGLKP ALWTSTGIGA GILLHITYSL  60
   61 LGIGLLISQS VVAFNVLKWI GAAYLIWVGF QCLRAKPQPL SDEPLQQTLP KETAWQAFRL 120
  121 GFLTNVLNPK ATLFFVALFS VLISPETPKW IQGVYGGWMF IATTLWFCGF SFFLSGERVR 180
  181 RVFQRFSHWI ERVMGVVLFG LAARLFAATR D

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.75
Transmembrane Helix	8	29	0.74
Cytoplasmic	30	40	0.83
Transmembrane Helix	41	62	0.87
Non-Cytoplasmic	63	70	0.56
Transmembrane Helix	71	90	0.84
Cytoplasmic	91	125	0.83
Transmembrane Helix	126	143	0.91
Non-Cytoplasmic	144	153	0.79
Transmembrane Helix	154	176	0.89
Cytoplasmic	177	187	0.94
Transmembrane Helix	188	208	0.89
Non-Cytoplasmic	209	211	0.87