YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83636656, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARINLRPWR EELRAERQKQ FITVLLGMLI ISAGAGFLWH RYVEGAIEYQ VQRNNYVRNE  60
   61 IAQLEKQIKE IRELKKKRDA LIERMKVIQD LQGKRPIIVR VFDELVKTNP DGVYFTNLVK 120
  121 KGETLEIKGV GESNSRISSL MRRLDESDWF KEPNLTSVKA LRDGESKSTF NMTVKQEAPK 180
  181 EESRKGGA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.98
Transmembrane Helix	21	43	0.92
Non-Cytoplasmic	44	188	0.99