YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83648540, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDDVNKSR RRFLVGATSV VGGIGAIGAA VPFVASWNPS AKAKAAGAPV KVNISKIEPG  60
   61 QQMTVEWRGK PVWVVRRTPE MLKGLDSIAE QLQDPQSEKP QQPAYAQNPH RSIKDEYVIL 120
  121 VGICTHLGCS PKFLPEVIPD ETVGGFYCPC HGSKFDLAGR VFKDVPAPKN LEVPPHMYVD 180
  181 DVNLIVGEDK ENA

Type	Start	End	Confidence
Cytoplasmic	1	12	0.82
Transmembrane Helix	13	34	0.82
Non-Cytoplasmic	35	193	0.96