YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83646799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTAELSRY SRHLSLPEFG RAGQEQLRAS RVLIVGAGGL GSPLGLYLAA AGVGILGIVD  60
   61 GDVVEESNLQ RQVLYTVDDI GQPKAERAAA RLNALNPHVD IRPYTMTLSS ENALGLIKDY 120
  121 DLVIDGTDNF PTRYLTNDAC VLAGKPNVYG SIFQFEGQAS VFHHEGGPCY RCLFPEPPPP 180
  181 GMVPSCAEGG VLGVLPAMIA GIQATEAIKI LTGMGDTLSG RLLQYNALSM TFDELRLRRD 240
  241 PECPVCGDHP SITALIDYDA FCGVPKALAQ ECDINPEALN ARLQKGEQMT LIDVREPYER 300
  301 EICAIDGSLH IPLQSLPARI HEFSKEQTLV FYCKSGGRSA GARQLFSDAD FHRVYNLSGG 360
  361 ILAWADKIDP DMPRY

Type	Start	End	Confidence
Cytoplasmic	1	31	0.76
Transmembrane Helix	32	58	0.65
Non-Cytoplasmic	59	375	0.94