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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83646376, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRANSRFFS HYRFYSLRTR IISLILLIMT IAALAILYFT HRDVGRAMLH AEESSAQNVL  60
   61 KLVELNIKAG YDQLTGDKIE ILSNLQSDLQ SVSEIAQSSF KVYGDLYKSG RVSQEEAEAM 120
  121 AFKWLREVRF GEVEVFVFNR QGGVMAHPEH SVEATYITSL RDFKGRVIYQ TMADDNLDAS 180
  181 GDKAIFNWRK PGSDRDSRHI GYFLPLPDWK MTLVAMVDFE YVEAESRKKM SAIIDSLRKT 240
  241 FPDIKVANTG YAYLFNGQSE ILVPPPGNDE EGEAPMSLNG EQQNLLAELI GQIAAQEQIG 300
  301 QVMYHYLDPF VASARHDEER QVVAYVSYFK PFDWYLSVVV PVEEISAPAE NLVKSQSLII 360
  361 GFFFIGSILV AFIWVSRISR PLDFLTNYAK QLPSQDFLKD DQPNSTIQSL AVRSRDEVGR 420
  421 LAESFIFMEV ELKKNIKEAC REKEAAEQAN QAKSEFLARM SHEIRTPMNG VLGMASILAD 480
  481 TPLSEKQRKY LDTIVSSGES LLNIINDILD FSKIEAGKLD LDNHPFKLSE LLSYLTDIFS 540
  541 PRAHSKNIEL ICAISDGIPE TLIGDSGRLR QILTNLVGNA LKFTQQGSIQ IIVEISDEDA 600
  601 RNMKLKISVI DTGIGIPLGK QQKIFESFSQ ADGSTTRTYG GTGLGLSISK SLVELMGGEL 660
  661 GVESRPGEGS SFWFSVWLEK DPSISGISTL TAKTVGATGR SQSPPLSGRV LLVEDHPINQ 720
  721 EYAVELLNMI GITADIAENG REALTRLAKN HYDIVLMDCQ MPVMDGYETA MAIRAAEQSH 780
  781 PGSRRLPIVA LTANALPADQ QRCMDSGMDD FLAKPFSIQQ LYASLARWLP PAKARIADRS 840
  841 AK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle