YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83633852, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLTRPLSA LTLAFFTLAG SAQASAADTS ISTHSAAAVA QTANYITTRD GVQIYYKDWG  60
   61 PKGAPVVVFS HGWPLSSDSW ESQMLFLADK GYRVVAHDRR GHGRSSQPWE GNDMDHYADD 120
  121 LATVIETLDL KDVTLVGFST GGGEVARYIG RHGTQRVKKA ALISAVTPLM LKTDSNPIGL 180
  181 PLQVFDDIRN ASLKDRSQLY LDIASGPFFG FNRPGAQTSQ GMIQSFWAQG MQGGHKNTYD 240
  241 SIAAFSATDF RDDLKKFDIP TLIVHGDDDQ IVPIDASARA AVKLIKNAEL IEYPGAPHGI 300
  301 TDTHKDRLNQ DLLSFLQH

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	318	0.99