YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83633200, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKETRHIKL LILGSGPAGY TAAVYAARAN LNPVIITGMQ MGGQLTTTTD VDNWPGDDAG  60
   61 VQGPELMQRM QKHAERFDTE IIFDHINETD LSQRPFRLKG DNGEYTCDAL IIATGASAQY 120
  121 LGLDSEEAFK GKGVSACATC DGFFYRKQKV AVIGGGNTAV EEALYLSNIA AEVTLVHRRD 180
  181 KLRAEKILQD KLFEKEQNGN IKIIWDHTLD EVLGDDSGVT GLRLRSTKDD STQELEVTGV 240
  241 FIAIGHKPNT DIFAGQLDMK DGYIKIRSGS EGAATQTSVP GVFAAGDVAD HIYRQAVTSA 300
  301 GFGCMAALDA EKFLDQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	316	0.99