YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82703017, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKSYPGSCG RGRGFTLVEV LVALAIIAVA LMAALRVAGQ GTLTVGELRS RLLAGWVAEN  60
   61 FLAEQRTRGA WPSPGTYRGT AKQGNMDFTW RADITETANP SFRRANISVF APAGESHLLA 120
  121 HLTGYLAQPA VPGNP

Type	Start	End	Confidence
Cytoplasmic	1	14	0.53
Transmembrane Helix	15	35	0.60
Non-Cytoplasmic	36	135	0.85