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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62128373, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSIGAVIT ILVLSKPFFT TEEVIPTMTQ VAKKILVTCA LPYANGSIHL GHMLEHIQAD  60
   61 VWVRYQRMRG HEVNFICADD AHGTPIMLKA QQLGITPEQM IGEMSQEHQT DFAGFNISYD 120
  121 NYHSTHSDEN RELSELIYTR LKENGFIKNR TISQLYDPEK GMFLPDRFVK GTCPKCKSAD 180
  181 QYGDNCEVCG ATYSPTELIE PKSVVSGATP VMRDSEHFFF DLPSFSEMLQ AWTRSGALQE 240
  241 QVANKMQEWF ESGLQQWDIS RDAPYFGFEI PNAPGKYFYV WLDAPIGYMG SFKNLCDKRG 300
  301 DTTSFDEYWK KDSDAELYHF IGKDIVYFHS LFWPAMLEGS HFRKPTNLFV HGYVTVNGAK 360
  361 MSKSRGTFIK ASTWLKHFDA DSLRYYYTAK LSSRIDDIDL NLEDFVQRVN ADIVNKVVNL 420
  421 ASRNAGFINK RFDGVLAAEL ADPQLYKTFT DAAAVIGEAW ESREFGKAIR EIMALADVAN 480
  481 RYVDEQAPWV VAKQEGRDAD LQAICSMGIN LFRVLMTYLK PVLPTLSERV EAFLNSELNW 540
  541 DAIEQPLLSH KVNTFKALYN RIDMKQVEAL VEASKEEVKA AAAPVTGPLA DFPIQETITF 600
  601 DDFAKIDLRV ALIENAEFVE GSDKLLRLTL DLGGEKRNVF SGIRSAYPDP QALIGRQTVM 660
  661 VANLAPRKMR FGVSEGMVMA AGPGGKDIFL LSPDDGAKPG QQVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle