YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78610757, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVRKAVIPA AGLGTRFLPA TKAMAKEMLP IVDKPTIQFI VEEAKASGIE DILIITGKGK  60
   61 RPIEDHFDSA PELEQNLKSK NKTKMLKMVN ETTDMGVNLY FIRQSHPNGL GDAVRLAKSF 120
  121 VADEPFVVML GDDLMEDKVP LSKQLINEYE ETHASQLAVM KVPHNEVDKY GVINPENKVK 180
  181 DDLYNVKNFV EKPDVDKAPS DLAIIGRYLL TPEIFDVLEN QKPGLGGEIQ LTDAIDELNK 240
  241 TQRVFAHEFK GRRYDVGNKF GYLETSIEYG LKHPEVKDDL KKYIIKLGEE LKQSEKKENK 300
  301

Type	Start	End	Confidence
Signal Peptide	1	25	0.88
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	300	0.99