YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82546042, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMLFSARDR YNSSGQHPRS TDEFIMIRNV LLAFMICSGM TLLGGCSSVM SHTGGKEGTY  60
   61 PGTRASATMI GDDETNWGTK SLAILDMPFT AVMDTLLLPW DVFRKDSSVR SHVEKSEANA 120
  121 QATNAVIPPA RMPDN

Type	Start	End	Confidence
Cytoplasmic	1	24	0.81
Transmembrane Helix	25	51	0.75
Non-Cytoplasmic	52	81	0.83
Transmembrane Helix	82	100	0.49
Cytoplasmic	101	135	0.62