YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74313898, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMFFDWWFA TSPRLRQFCW AFWLLMLVTL IFLSSTHHEE RDALIRLRAS HHQQWATLYR  60
   61 LVDTTPFSEE KTLPFSPLDF QLPGAQLVSW HPSAQGGELA LKTLWEAVPS AFTRLAERNV 120
  121 SVSRFSLSVE GDDLLFTLQL ETPHEG

Type	Start	End	Confidence
Cytoplasmic	1	17	0.38
Transmembrane Helix	18	38	0.79
Non-Cytoplasmic	39	146	0.53