YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|81246579, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVKDEHKV ALRKWHEELQ DKRGERASLR RSTTVNDVCL TDGFRLFLKN RQIKWQDEPE  60
   61 WRITALALIA AVSANVKAID ERQPFAAQLA AVMKKGRFTR LLAVKTPDDL LRQLRRAVKL 120
  121 LNGSVNLDSL EEGVFRWCQE SDDLLNHHRR QQRPTEFIRI RWALGAGRWA LGAGRWALGA 180
  181 GILPGWRRR

Type	Start	End	Confidence
Cytoplasmic	1	157	0.56
Transmembrane Helix	158	179	0.68
Non-Cytoplasmic	180	189	0.57