YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82544546, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIFLPLLL VALSPVAHSE GVQEVEIDAP LSGWHPAEGE DASFSQSINY PASSVNMADD  60
   61 QNISAQIRGK IKNYAAAGKI QQGRLVVNGA SMPQRVESDG SFARPYIFTE GSNSVQVISP 120
  121 DGQSRQKMQF YSTPGTGTIR ARLRLVLSWD TDNTDLDLHV VTPDGEHAWY GNTVLKNSGA 180
  181 LDMDVTTGYG PEIFAMPAPV HGRYQVYMKW STKTGHRVRV FPVSIFRFVW GEPTVIFVRS 240
  241

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	240	0.99