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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|81244544, gi|...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGKPAARQG DMTQYGGSIV QGSAGVRIGA PTGVACSVCP GGVTSGHPVN PLLGAKVLPG  60
   61 ETDIALPGPL PFILSRTYSS YRTKTPAPVG SLGPGWKMPA DIRLQLRDNT LILSDNGGRS 120
  121 LYFEHLFPGE DGYSRSESLW LVRGGVAKLD EGHRLAALWQ ALPEELRLSP HRYLATNSPQ 180
  181 GPWWLLGWCE RVPEADEVLP APLPPYRVLT GLVDRFGRTQ TFHREAAGEF SGEITGVTDG 240
  241 AGRHFQLVLT TQAQRAEEAR QQAISGGTEP SAFPDTLPGY TEYGRDNGIR LSAVWLTHDP 300
  301 EYPENLPAAP LVRYGWTPRG ELAAVYDRSN TQVRSFTYDD KYRGRMVAHR HTGRPEIRYR 360
  361 YDSDGRVTEQ LNPAGLSYTY QYEKDRITIT DSLNRREVLH TQGEAGLKRV VKKEHADGSV 420
  421 TQSQFDAVGR LRTQTDAAGR TTEYSPDVVT GLITRITTPD GRASAFYYNH HSQLTSATGP 480
  481 DGLEIRREYD EWGRLIQETA PDGDIIRYRY DNPHSDLPCA TEDATGSRKT MTWSRYGQLL 540
  541 SFTDCSGYVT RYDHDRFGQM TAVHREEGLS QYRAYDSRGQ LIAVKDTQGH ETRYEYNAAG 600
  601 DLTAVIAPDG SRNGTQYDAW GKAIRTTQGE LTRSMEYDAA GRVIRLTSEN GSHTTFRYDV 660
  661 LDRLIQETGF DGRTQRYHHD LTGKLIRSED EGLVTHWHYD EADRLTHRTV NGETAEQWQY 720
  721 DKRGWLTDIS HLSEGHRVTV HYRYDEKGRL TGERQTVHHP QPEALLWQHE TRHAYNAQGL 780
  781 ANRCIPDSLP AVEWLTYGSG WLAGMKLGDT PLVDFTRDRL HRETLRRFGR YELTTAYTPA 840
  841 GQLQSQHLNS LQYDRDYTWN DNGELIRISS PRQTRSYSYS TTGRLTGVHT TAANLDIRIP 900
  901 YATDPAGNRL PDPELHPDST LSMWPDNRIA RDAHYLYRYD RYGRLTEKTD LIPEGGIRTD 960
  961 DERTHRYHYD SQHRLVHYTR TQYAEPLVES RYLYDPLGRR VAKRVWRRER DLTGWMLLSR1020
 1021 KPEVTWYGWD GDRLTTIQND RSRIQTIYQP GSFTPLIRVE TATGELAKTQ RRSLADTLQQ1080
 1081 SGGEDGGSVV FPPVLVQMLD RLESEILADR VSEESRRWLA SCGLTVAQMQ SQMDPVYTPA1140
 1141 RKIHLYHCDH RGLPLALIST EGATEWCAEY DEWGNLLNEE NPHQLQQLIR LPGQQYDEES1200
 1201 GLYYNRHRYY DPLQGRYITQ DPIGLKGGWN FYQYPLNPIS EIDPQGLNPL ILGVVALMSC1260
 1261 GLFSSGGVIQ SGQQRRDQYG RKVNPEADKL TDEHKSGVNP GGNCSPQNLS DLQNEKNRLC1320
 1321 NQSRACAPQM LRKEILRRYE INLACASVRK QINNQCFGGG DKAHMEEENK AYKTAADCSG1380
 1381 LIK

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