YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ECPA_SHIBS
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHWDITSSI QLGKKCNEKK VLAIALVTVF TGMGVAQAAD VTAQAVATWS ATAKKDTTSN  60
   61 LVVTSLGSLA FQYAEGIKGF NSQKGLFDVA IEGDSTATAF KLTSRLITNT LTQLDTSGST 120
  121 LNVGVDYNGA AVEKTGDTVM IDTANGVLGG NLSPLANGYN ASNRTTAQDG FTFTIISGTT 180
  181 NGTTAVTDYS TLPEGIWSGD VSVQFDATWT S

Type	Start	End	Confidence
Signal Peptide	1	38	0.95
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	211	0.99