YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82778673, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLIFVDKDS NMNMTKGALI LSLSFLLAAC SSIPQNIKGN NQPDIQKSFV AVHNQPGLYV  60
   61 GQQARFGGKV INVINGKTDT LLEIAVLPLD SYAKPDIEAN YQGRLLARQS GFLDPVNYRN 120
  121 HFVTILGTIQ GEQPSFINKV PYNFLEVNMQ GIQVWHLREV VNTTYNLWDY GYGAFWPEPG 180
  181 WGAPYYTNAV SQVTPELVK

Type	Start	End	Confidence
Signal Peptide	1	32	0.89
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	199	0.99