YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82778656, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRKLLIPL LFCGAMLTAC DDKSAENAAA MTPEVGVVTL SPGSVNVLSE LPGRTVPYEV  60
   61 AEIRPQVGGI IIKRNFIEGD KVNQGDSLYQ IDPAPLQAEL NSAKGSLAKA LSTASNARIT 120
  121 FNRQASLLKT NYVSRQDYDT ARTQLNEAEA NVTVAKAAVE QATINLQYAN VTSPITGASG 180
  181 KSSVTVGALV TANQADSLVT VQRLDPIYVD LTQSVQDFLR MKEEVASGQI KQVQGSTPVQ 240
  241 LNLENGKRYS QTGTLKFSDP TVDETTGSVT LRAIFPNPNG DLLPGMYVTA LVDEGSRQNV 300
  301 LLVPQEGVTH NAQGKATALI LDKDDVVQLR EIEASKAIGD QWVVTSGLQA GDRVIVSGLQ 360
  361 RIRPGIKARA ISSSQENAST ESKQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	384	0.99