YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82778430, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLKTSIKT ITYLSDTGCL EIQGASLIDS NDANTAPLHK KTISSLSGAV ESMMKKLEDV  60
   61 GVLVARILMP ILFITAGWGK ITGYAGTQQY MEAMGVPGFM LPLVILLEFG GGLAILFGFL 120
  121 TRTTVLFTAG FTLLTAFLFH SNFAEGVNSL MFMKNLTISG GFLLLAITGP GAYSIDRLLN 180
  181 KKW

Type	Start	End	Confidence
Cytoplasmic	1	61	0.99
Transmembrane Helix	62	82	0.93
Non-Cytoplasmic	83	97	0.80
Transmembrane Helix	98	117	0.92
Cytoplasmic	118	123	0.67
Transmembrane Helix	124	144	0.89
Non-Cytoplasmic	145	155	0.77
Transmembrane Helix	156	175	0.92
Cytoplasmic	176	183	0.86