YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82776307, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLFLLVAV MLLSGCLTAP PKEAARPTLM PRAQSYKDLT HLPTPTGKIF VSVYNIPDET  60
   61 GQFKPYPASN FSTAVPQSAT AMLVTALKDS RWFIPLERQG LQNLLNERKI IRTAQENGTV 120
  121 AINNRIPLQS LTAANIMVEG SIIGYESNVK SGGVGARYFG IGADTQYQLD QIAVNLRVVN 180
  181 VSTGEILSSV NTSKTILSYE VQVGVFRFID YQRLLEGEVG YTSNEPVMLC LMSAIETGGI 240
  241 FLINDGIDRG LWDLQNKAER QNDILVKYRH MSVPPES

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	277	0.99