YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|81240380, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNTCSTNWK HHRLFFAAVL MLWCAQTAAY SGQCHTTQGN PYIGVNFGVK TLEEEENTAG  60
   61 VVKDKFYQWN ESNDYYVSCD CDKDNVRNGR WAFAADSPLV YLGDNWYKIN DYLAAKVLLQ 120
  121 VKGSSPTAVP FENVGTGGDT RWHICDPGGQ RLGGQGASGN SGSFSLKILQ PFVGSVVIPS 180
  181 MALARLFECY NIPAGDSCTT TGTPVLVYYL SGTINSLGSC SVNAGETIEV ELGDVFAANF 240
  241 RVVGHKPLGA RTAELAIPVR CNTGNAGLVN VNLSLTATTD PSYPQAIKTS CPGVGVVVTD 300
  301 SQNNIISPAG GTLPLSIPDD ADSIARMNVY PVSTTGVPPE TGRFEATATV RINFD

Type	Start	End	Confidence
Signal Peptide	1	31	0.96
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	355	0.99