YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82749857, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFKCLFVL MLAVIVFAAA CGNSSSLDNQ KNASNNSDSK SGGYKPKELT VQFVPSQNAG  60
   61 TLEAKAKPLE KLLSKELGIP VKVSVSTNYN TIVEAMKSKK VDVGFLPPTA YTLAHDQKAA 120
  121 DLLLQAQRFG VKEDGSASKE LVDSYKSEIL VKKDSKIKSL KDLKGKKIAL QDVTSTAGYT 180
  181 FPLAMLKNEA GINATKDMKI VNVKGHDQAV ISLLNGDVDA AAVFNDARNT VKKDQPNVFK 240
  241 DTRILKLTQA IPNDTISVRP DMDKDFQEKL KKAFIDIAKS KEGHKIISEV YSHEGYTETK 300
  301 DSNFDIVREY EKLVKDMK

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	318	0.99