YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|167617964
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFVRSLLLL VYFVVYTVPY ATACFIAFPF MRPNARYWMA VGWCKSTLFV ARWLNGIRYR  60
   61 IEGYENLPDG PAVLLPKHQS AWETIALPAL MPKPLCYVFK RELLYVPFFG WALGMLHMVH 120
  121 INRKDGKNAF DSVIRQGRKR MAEGAWVIMF PEGTRTPVGG QGKYKTGGAR FAVGAGAPVV 180
  181 PIAHNAGRVW PRNSFTKYPG TVTVSIGKPI DTQGLTPDQL NERVENWIEA EMRRIDPDAY 240
  241 RHERDGARGA VRASDAARS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.64
Transmembrane Helix	8	29	0.68
Non-Cytoplasmic	30	259	0.54