YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|167620192
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIASLKKLL VAGLIGASFV AATAHAADLL DEVKQRGTLR IGLEGTFPPF NSKNPQGELV  60
   61 GFDVDIAKAI AAKLGVKPEF VTTEWSGIIA GLQAGKFDVI VNQVGITDQR KQTLDFSPAY 120
  121 TYSSAQLIQR KDDARQFKSL EDLKGKKLGV ALGTNYMDMA KSVPGIDVKT YPGAPEYLRD 180
  181 LAAGRLDAAL NDRLMLAYLT KNSQLPLRPG ANVGSANPSG IPFRKGNPKF AKAIADAMTQ 240
  241 LEADGTFTKI SDKWFGIDVT KPVK

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	264	0.99