YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83717248, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARTMRSRAV AAAVAFAMSA APAASIGTFL SLAGAQSAVA ATTAVDNYAA TKYPIILVHG  60
   61 LTGTDKYANV VEYWYGIQED LQAHGATVYV ANLSGFQSDD GPNGRGEQLL AYVQQVLAAT 120
  121 GASKVNLIGH SQGGLTSRYV AAVAPQLVAS VTTIGTPHRG SEFADFVQTV TAYDPTGLSS 180
  181 TVIAAFANVF GILTSSNHNT NQDALAALKT LTTSQAATYN QNYPSAGLGA PGSCQTGAPT 240
  241 ETVGGNKHLL YSWAGTAIQP TLSILGVTGA TDTSTIPVID PSNVLDPSTL AMLGTGTVMI 300
  301 NRGSGANDGL VSRCSSLYGQ VLSTSYKWNH LDEINQLLGV RGAYAEDPVA VIRTHANRLK 360
  361 TQGV

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	364	0.98