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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|81299891, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASLTDVRQ PIAHWHSLTV EECHQQLDAH RNGLTAEVAA DRLALYGPNE LVEQAGRSPL  60
   61 QILWDQFANI MLLMLLAVAV VSGALDLRDG QFPKDAIAIL VIVVLNAVLG YLQESRAEKA 120
  121 LAALKGMAAP LVRVRRDNRD QEIPVAGLVP GDLILLEAGD QVPADARLVE SANLQVKESA 180
  181 LTGEAEAVQK LADQQLPTDV VIGDRTNCLF QGTEVLQGRG QALVYATGMN TELGRIATLL 240
  241 QSVESEKTPL QQRLDKLGNV LVSGALILVA IVVGLGVLNG QSWEDLLSVG LSMAVAIVPE 300
  301 GLPAVITVAL AIGTQRMVQR ESLIRRLPAV ETLGSVTTIC SDKTGTLTQN KMVVQQIHTL 360
  361 DHDFTVTGEG YVPAGHFLIG GEIIVPNDYR DLMLLLAAGA VCNDAALVAS GEHWSIVGDP 420
  421 TEGSLLTVAA KAGIDPEGLQ RVLPRQDEIP FTSERKRMSV VVADLGETTL TIREGQPYVL 480
  481 FVKGSAELIL ERCQHCFGNA QLESLTAATR QQILAAGEAM ASAGMRVLGF AYRPSAIADV 540
  541 DEDAETDLTW LGLMGQIDAP RPEVREAVQR CRQAGIRTLM ITGDHPLTAQ AIARDLGITE 600
  601 VGHPVLTGQQ LSAMNGAELD AAVRSVEVYA RVAPEHKLRI VESLQRQGEF VAMTGDGVND 660
  661 APALKQANIG VAMGITGTDV SKEASDMVLL DDNFATIVAA VEEGRIVYGN IRKFIKYILG 720
  721 SNIGELLTIA SAPLLGLGAV PLTPLQILWM NLVTDGIPAL ALAVEPGDPT IMQRRPHNPQ 780
  781 ESIFARGLGT YMLRVGVVFS AFTIVLMVIA YQYTQVPLPG LDPKRWQTMV FTTLCLAQMG 840
  841 HAIAVRSDLL TIQTPMRTNP WLWLSVIVTA LLQLALVYVS PLQKFFGTHS LSQLDLAICL 900
  901 GFSLLLFVYL EAEKWVRQRR Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle