YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DNSL1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSGQPVFPR RVPDAYIAMR GLVVASLLIL LVGGTDAFRI CAFNAHRLTL TKVIKESVMD  60
   61 TLVQILARCD IMVLQEVVDS SQNTVLFLLQ KLQSSKSYSF LNSSLLGRST YKEKYVYIYR 120
  121 SDKTQVLNFY QYNDTEDIFA REPFVAQFTL PSKILPSVVL VPLHTTPKDV EKELNALYDV 180
  181 FLDVSQRWQN ENVILLGDFN ADCASLAKKR LNSLLLRTKA GFHWVIPDGE DTTVRASTNC 240
  241 TYDRIVMHGQ GCQKLLKAAA TFDFPRRFQL TEEEALRVSD HYPVEVELNK AAQGIPPHCL 300
  301 STLLLLSLSQ LG

Type	Start	End	Confidence
Signal Peptide	1	37	0.64
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	312	0.93